STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAMY_1069Uncharacterized protein yohN precursor. (145 aa)    
Predicted Functional Partners:
EAMY_2258
Uncharacterized 22.5 kDa protein in cps region (ORF2), Phosphatidic acid phosphatase type 2-like.
  
     0.762
EAMY_2181
Hypothetical protein predicted by Glimmer/Critica.
  
     0.733
yprA
Uncharacterized 24.3 kDa protein (URF 1); Abortive infection protein, CAAX amino terminal protease family.
  
     0.701
EAMY_2180
Hypothetical protein predicted by Glimmer/Critica.
  
     0.670
yjjA
Uncharacterized protein yjjA precursor (Protein P-18).
  
     0.665
EAMY_0909
Hypothetical protein predicted by Glimmer/Critica.
  
     0.631
EAMY_1761
TonB-dependent receptor protein precursor; TonB dependent receptor, TC 1.B.14.2.-The Outer Membrane Receptor (OMR) Family.
  
     0.628
EAMY_0858
Uncharacterized HTH-type transcriptional regulator ybbH; Sugar isomerase (SIS).
  
     0.558
EAMY_2156
Hypothetical protein.
  
     0.555
psiF
Phosphate starvation-inducible protein psiF precursor; PsiF, psiF repeat.
  
    0.553
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.