STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAMY_1237Hypothetical protein. (369 aa)    
Predicted Functional Partners:
EAMY_1546
Hypothetical protein; Zn-dependent hydrolases, including glyoxylases.
  
     0.764
EAMY_2707
Putative conserved domain.
  
     0.755
hofM
Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]'.
  
     0.753
EAMY_1393
UPF0319 protein yccT precursor; Belongs to the UPF0319 family.
  
     0.746
EAMY_0909
Hypothetical protein predicted by Glimmer/Critica.
  
     0.719
EAMY_0922
Hypothetical protein; Oligopeptide transporter OPT superfamily.
  
     0.719
EAMY_2156
Hypothetical protein.
  
     0.715
EAMY_3537
Abortive infection protein, CAAX amino terminal protease family.
  
     0.710
srfC
Putative virulence factor.
  
     0.701
EAMY_1239
Hypothetical protein predicted by Glimmer/Critica.
  
     0.699
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.