STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAMY_2882Uncharacterized protein HI0907. (171 aa)    
Predicted Functional Partners:
priC
Primosomal replication protein priC.
  
     0.773
EAMY_0579
TetR-family transcriptional regulator; Homeodomain-like.
  
     0.764
pilF
Uncharacterized protein HI0366 precursor; Pilus biogenesis/stability type IV, PilW, type_IV_pilW: type IV pilus biogenesis/stability protein PilW.
  
    0.747
EAMY_0484
Probable regulatory protein embR; Winged helix repressor DNA-binding, Transcriptional regulatory protein, C terminal.
  
     0.716
rtn2
Uncharacterized protein yhjH; FOG: EAL domain.
  
     0.715
EAMY_3259
Hypothetical protein; SUA5/yciO/yrdC, N-terminal; Belongs to the SUA5 family.
  
     0.713
secM
Secretion monitor precursor; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
 
     0.674
EAMY_1024
Protein of unknown function DUF6, transmembrane.
  
     0.669
hslJ
Heat shock protein hslJ; Protein of unknown function DUF306, Meta and HslJ, Domain of unknown function (306).
  
     0.666
srfC
Putative virulence factor.
  
     0.642
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.