STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfPUPF0131 protein ytfP; Butirosin biosynthesis, BtrG-like, AIG2-like family. (116 aa)    
Predicted Functional Partners:
ytfN
Uncharacterized protein ytfN; Protein of unknown function DUF490, Family of unknown function (DUF490).
 
     0.935
ytfM
Uncharacterized protein ytfM precursor; Bacterial surface antigen (D15), Surface antigen.
 
   
 0.932
ytfB
Bifunctional protein glmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase ], Opacity-associated protein A, Opacity-associated protein A LysM-like domain.
  
     0.701
yecF
Uncharacterized protein yecF.
  
     0.668
atpI
ATPase, F0 complex, subunit I, proteobacteria-type, ATP synthase I chain.
  
     0.643
smp
Protein smp precursor.
  
     0.628
cpxP
Periplasmic protein cpxP precursor.
  
     0.624
yqjE
Inner membrane protein yqjE.
  
     0.602
ychH
Uncharacterized protein ychH.
  
     0.590
pagC
Virulence-related outer membrane protein, Enterobacterial Ail/Lom protein.
  
     0.589
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.