STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAMY_3209Hypothetical protein predicted by Glimmer/Critica. (260 aa)    
Predicted Functional Partners:
EAMY_3210
Hypothetical protein.
       0.773
EAMY_3211
Putative type VI secretion system, effector protein vgr COG3501: Uncharacterized protein conserved in bacteria Protein of unknown function, DUF586 Rhs element Vgr protein.
       0.773
EAMY_3212
Putative type VI secretion system, core protein COG3521.
       0.773
EAMY_3213
Putative type VI secretion system, core protein COG3520: Uncharacterized protein conserved in bacteria Protein of unknown function DUF1305.
       0.697
EAMY_3214
Putative type VI secretion system, core protein COG3519: Uncharacterized protein conserved in bacteria Bacterial protein of unknown function (DUF879).
       0.697
EAMY_3215
Putative type VI secretion system, core protein COG3515: Uncharacterized protein conserved in bacteria ImpA-related N-terminal domain.
       0.433
EAMY_3216
Putative type VI secretion system, core protein COG3523: Uncharacterized protein conserved in bacteria Protein of unknown function DUF1215 ImcF-related TC 9.A.34.1.1 IcmF-related protein (IcmF-like protein).
       0.433
EAMY_3217
Hypothetical protein.
       0.433
EAMY_3218
Hypothetical protein.
       0.433
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.