STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppA3Putative ABC transport system, periplasmic component; Periplasmic dipeptide transport protein precursor (Dipeptide-binding protein) (DBP), Bacterial extracellular solute-binding protein, family 5, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family. (536 aa)    
Predicted Functional Partners:
dppC3
Binding-protein-dependent transport systems inner membrane component, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family.
  0.982
dppB3
Binding-protein-dependent transport systems inner membrane component, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family.
  0.981
dppF
Putative ABC transport system, ATP-binding component; ABC transporter related, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family.
 
 0.956
dppD3
Putative ABC transport system, ATP-binding component; ABC transporter related, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family.
 
 
 0.942
dppA1
Putative ABC transport system, periplasmic component; Bacterial extracellular solute-binding protein, family 5, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family.
  
  
 
0.901
tap3
Methyl-accepting chemotaxis protein I (MCP-I) (Serine chemoreceptor protein), Bacterial chemotaxis sensory transducer, Methyl-accepting chemotaxis protein (MCP) signaling domain.
 
   
  0.900
dppB1
Binding-protein-dependent transport systems inner membrane component, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family.
 
   0.722
sapC
Binding-protein-dependent transport systems inner membrane component, TC 3.A.1.5.5 Peptide transport system permease protein sapC.
 
  
 0.716
sapB
Binding-protein-dependent transport systems inner membrane component, TC 3.A.1.5.5 Peptide transport system permease protein sapB.
   
 0.596
dppC1
Binding-protein-dependent transport systems inner membrane component, TC 3.A.1.5.-The Peptide/Opine/Nickel Uptake Transporter (PepT) Family.
 
   0.542
Your Current Organism:
Erwinia amylovora
NCBI taxonomy Id: 665029
Other names: E. amylovora CFBP1430, Erwinia amylovora CFBP1430, Erwinia amylovora str. CFBP1430, Erwinia amylovora strain CFBP1430
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