Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SS1G_01317 | SS1G_04516 | A7E7N9 | A7EGS4 | Uncharacterized protein. | Cell division control protein; Belongs to the CDC6/cdc18 family. | 0.665 |
SS1G_01317 | SS1G_06591 | A7E7N9 | A7EMP2 | Uncharacterized protein. | CBFD_NFYB_HMF domain-containing protein. | 0.796 |
SS1G_01317 | SS1G_07677 | A7E7N9 | A7EQS4 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.784 |
SS1G_01317 | SS1G_08497 | A7E7N9 | A7ET42 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.691 |
SS1G_01317 | SS1G_08698 | A7E7N9 | A7ETP1 | Uncharacterized protein. | Ricin B-type lectin domain-containing protein. | 0.700 |
SS1G_01317 | SS1G_09609 | A7E7N9 | A7EWA0 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.691 |
SS1G_01317 | SS1G_10959 | A7E7N9 | A7F042 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.814 |
SS1G_01317 | SS1G_10960 | A7E7N9 | A7F043 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.784 |
SS1G_01317 | SS1G_12938 | A7E7N9 | A7F5R0 | Uncharacterized protein. | Uncharacterized protein. | 0.700 |
SS1G_01317 | SS1G_13662 | A7E7N9 | A7F7T2 | Uncharacterized protein. | Uncharacterized protein. | 0.700 |
SS1G_04516 | SS1G_01317 | A7EGS4 | A7E7N9 | Cell division control protein; Belongs to the CDC6/cdc18 family. | Uncharacterized protein. | 0.665 |
SS1G_04516 | SS1G_06591 | A7EGS4 | A7EMP2 | Cell division control protein; Belongs to the CDC6/cdc18 family. | CBFD_NFYB_HMF domain-containing protein. | 0.674 |
SS1G_04516 | SS1G_09609 | A7EGS4 | A7EWA0 | Cell division control protein; Belongs to the CDC6/cdc18 family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.507 |
SS1G_04516 | SS1G_10959 | A7EGS4 | A7F042 | Cell division control protein; Belongs to the CDC6/cdc18 family. | Histone H2A; Belongs to the histone H2A family. | 0.541 |
SS1G_04516 | SS1G_10960 | A7EGS4 | A7F043 | Cell division control protein; Belongs to the CDC6/cdc18 family. | Histone H2B; Belongs to the histone H2B family. | 0.416 |
SS1G_06591 | SS1G_01317 | A7EMP2 | A7E7N9 | CBFD_NFYB_HMF domain-containing protein. | Uncharacterized protein. | 0.796 |
SS1G_06591 | SS1G_04516 | A7EMP2 | A7EGS4 | CBFD_NFYB_HMF domain-containing protein. | Cell division control protein; Belongs to the CDC6/cdc18 family. | 0.674 |
SS1G_06591 | SS1G_08698 | A7EMP2 | A7ETP1 | CBFD_NFYB_HMF domain-containing protein. | Ricin B-type lectin domain-containing protein. | 0.711 |
SS1G_06591 | SS1G_10960 | A7EMP2 | A7F043 | CBFD_NFYB_HMF domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.500 |
SS1G_06591 | SS1G_12938 | A7EMP2 | A7F5R0 | CBFD_NFYB_HMF domain-containing protein. | Uncharacterized protein. | 0.711 |
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