STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS1G_04335DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1246 aa)    
Predicted Functional Partners:
SS1G_11798
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
0.999
SS1G_07546
Vezatin domain-containing protein.
   
 0.998
SS1G_08608
DNA_mis_repair domain-containing protein.
 
 0.994
SS1G_09785
DNA_mis_repair domain-containing protein.
 
 0.982
SS1G_14284
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
0.980
SS1G_04226
DNA_mis_repair domain-containing protein.
 
 0.977
SS1G_09786
Uncharacterized protein.
  
 0.976
SS1G_12686
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.968
msh3
DNA mismatch repair protein msh3; Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with msh2 to form MutS beta, which binds to DNA mismatches thereby initiating DNA repair. Msh3 provides substrate- binding and substrate specificity to the complex. When bound, the MutS beta heterodimer bends the DNA helix and shields approximately 20 base pairs. Acts mainly to repair insertion-deletion loops (IDLs) from 2 to 13 nucleotides in size, but can also repair base-base and single insertion-deletion mismatches that occur during replication. After mismatch bindi [...]
  
 
 
0.960
SS1G_11837
XPGI domain-containing protein.
   
 0.946
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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