STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS1G_04923Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
SS1G_05593
Uncharacterized protein.
   
 
 0.893
SS1G_04619
Uncharacterized protein.
    
 
 0.673
SS1G_13629
Nuclear cap-binding protein subunit 2.
   
 
 0.605
SS1G_09078
MIF4G_like_2 domain-containing protein.
   
 
 0.601
SS1G_01592
Uncharacterized protein.
   
 
 0.516
SS1G_00885
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.471
SS1G_05346
RPOLD domain-containing protein.
   
 
 0.422
SS1G_13608
CID domain-containing protein.
   
 
 0.418
SS1G_02201
mRNA cap guanine-N7 methyltransferase.
   
 
 0.417
SS1G_05223
Methyltransf_25 domain-containing protein.
   
 
 0.417
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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