STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS1G_06027P/Homo B domain-containing protein. (856 aa)    
Predicted Functional Partners:
SS1G_05586
Uncharacterized protein.
     
 0.755
SS1G_02522
Uncharacterized protein.
    
 0.748
SS1G_04685
Calreticulin.
 
  
 
 0.684
dapB
Probable dipeptidyl-aminopeptidase B; Type IV dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N- termini provided that the penultimate residue is proline.
     
 0.665
SS1G_06534
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.632
SS1G_01885
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.631
SS1G_01323
Rho-GAP domain-containing protein.
   
 
 0.618
kex1
Pheromone-processing carboxypeptidase kex1; Protease with a carboxypeptidase B-like function involved in the C-terminal processing of the lysine and arginine residues from protein precursors. Promotes cell fusion and is involved in the programmed cell death (By similarity).
   
 
 0.599
SS1G_02276
AMP_N domain-containing protein.
     
 0.566
SS1G_10536
cAMP-dependent protein kinase regulatory subunit.
   
  
 0.546
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.