STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
los1Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Involved in pre-tRNA splicing, probably by affecting the interaction of pre-tRNA with splicing endonuclease (By similarity); Belongs to the exportin family. (1023 aa)    
Predicted Functional Partners:
SS1G_04524
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.997
SS1G_13337
Uncharacterized protein.
    
 
 0.739
SS1G_11860
Xpo1 domain-containing protein.
   
 
 0.668
SS1G_09078
MIF4G_like_2 domain-containing protein.
   
  
 0.653
SS1G_11216
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
 
 
 0.653
SS1G_08631
Uncharacterized protein.
   
 
 0.649
SS1G_09963
Importin N-terminal domain-containing protein.
   
 
 0.639
SS1G_10171
CRM1_C domain-containing protein.
   
 
 0.639
SS1G_00569
Importin N-terminal domain-containing protein.
   
  
 0.630
SS1G_11425
Importin N-terminal domain-containing protein.
   
  
 0.627
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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