STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SS1G_07400Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
SS1G_11868
Uncharacterized protein.
    
 0.637
SS1G_11456
Uncharacterized protein.
    
 0.622
SS1G_04974
Trehalase.
      
 0.530
SS1G_07727
CDC73_C domain-containing protein.
    
 0.514
SS1G_06692
Uncharacterized protein.
    
 0.509
SS1G_07016
Uncharacterized protein.
    
 0.483
SS1G_02442
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.481
SS1G_02265
Tr-type G domain-containing protein.
    
 0.428
SS1G_10677
Uncharacterized protein.
    
 
 0.427
SS1G_13315
Uncharacterized protein.
    
 
 0.427
Your Current Organism:
Sclerotinia sclerotiorum
NCBI taxonomy Id: 665079
Other names: S. sclerotiorum 1980 UF-70, Sclerotinia sclerotiorum 1980 UF-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.