Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SS1G_00008 | SS1G_08947 | A7E3Y6 | A7EUE0 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
SS1G_00072 | SS1G_08947 | A7E450 | A7EUE0 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
SS1G_02105 | SS1G_08947 | A7E9X5 | A7EUE0 | Uncharacterized protein. | Uncharacterized protein. | 0.447 |
SS1G_08945 | SS1G_08947 | A7EUD8 | A7EUE0 | zf-CHCC domain-containing protein. | Uncharacterized protein. | 0.678 |
SS1G_08946 | SS1G_08947 | A7EUD9 | A7EUE0 | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | Uncharacterized protein. | 0.483 |
SS1G_08947 | SS1G_00008 | A7EUE0 | A7E3Y6 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
SS1G_08947 | SS1G_00072 | A7EUE0 | A7E450 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
SS1G_08947 | SS1G_02105 | A7EUE0 | A7E9X5 | Uncharacterized protein. | Uncharacterized protein. | 0.447 |
SS1G_08947 | SS1G_08945 | A7EUE0 | A7EUD8 | Uncharacterized protein. | zf-CHCC domain-containing protein. | 0.678 |
SS1G_08947 | SS1G_08946 | A7EUE0 | A7EUD9 | Uncharacterized protein. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.483 |
SS1G_08947 | SS1G_12898 | A7EUE0 | A7F5M0 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
SS1G_08947 | nip1 | A7EUE0 | A7E471 | Uncharacterized protein. | Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.452 |
SS1G_12898 | SS1G_08947 | A7F5M0 | A7EUE0 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
nip1 | SS1G_08947 | A7E471 | A7EUE0 | Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | Uncharacterized protein. | 0.452 |