STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ81766.1Helicase conserved C-terminal domain-containing protein. (1715 aa)    
Predicted Functional Partners:
SFZ81767.1
SNF2 family N-terminal domain-containing protein; Manually curated.
 
 
   0.962
SFZ81771.1
HNH endonuclease.
 
     0.784
SFZ81769.1
Hypothetical protein.
 
     0.770
SFZ81762.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
 
     0.698
SFZ81764.1
Predicted nucleotidyltransferase component of viral defense system.
 
     0.698
mutM
DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
 
  
 0.688
SFZ81759.1
Hypothetical protein.
 
     0.637
SFZ81760.1
Helicase conserved C-terminal domain-containing protein.
 
     0.612
SFZ81757.1
Hypothetical protein.
 
     0.608
SFZ84584.1
Hypothetical protein.
  
 
   0.521
Your Current Organism:
Devosia enhydra
NCBI taxonomy Id: 665118
Other names: ATCC 23634, D. enhydra, JCM 21106, NBRC 102409, Prosthecomicrobium enhydrum, Vasilyevaea enhydra, Vasilyevea enhydrum, strain 9b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.