STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ81877.12-methylcitrate dehydratase PrpD. (475 aa)    
Predicted Functional Partners:
SFZ81875.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
 
  0.817
SFZ81870.1
Alcohol dehydrogenase GroES-like domain-containing protein.
 
  
  0.765
SFZ81872.1
2-hydroxyglutaryl-CoA dehydratase, D-component.
       0.752
SFZ81874.1
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB.
       0.752
SFZ83698.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.667
SFZ82060.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.625
SFZ86802.1
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 
 0.625
SFZ81880.1
iron(III) transport system permease protein.
 
     0.590
SFZ84829.1
2-Methylisocitrate lyase, PEP mutase family.
 
  
 0.576
SFZ86806.1
Phosphoenolpyruvate phosphomutase.
 
  
 0.570
Your Current Organism:
Devosia enhydra
NCBI taxonomy Id: 665118
Other names: ATCC 23634, D. enhydra, JCM 21106, NBRC 102409, Prosthecomicrobium enhydrum, Vasilyevaea enhydra, Vasilyevea enhydrum, strain 9b
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