STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ83094.1BMFP domain-containing protein YqiC. (83 aa)    
Predicted Functional Partners:
SFZ86065.1
Hypothetical protein.
  
     0.696
SFZ86418.1
Signal transduction histidine kinase.
  
     0.676
SFZ85338.1
Hypothetical protein.
  
     0.665
SFZ84879.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.648
SFZ80897.1
Lipopolysaccharide export system permease protein.
  
     0.630
SFZ83539.1
Histidine phosphotransferase ChpT.
  
     0.627
SFZ86253.1
Conserved hypothetical protein.
  
     0.621
lgt
Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.617
SFZ83098.1
SAM-dependent methyltransferase, MidA family.
       0.615
SFZ80973.1
Hypothetical protein.
  
     0.611
Your Current Organism:
Devosia enhydra
NCBI taxonomy Id: 665118
Other names: ATCC 23634, D. enhydra, JCM 21106, NBRC 102409, Prosthecomicrobium enhydrum, Vasilyevaea enhydra, Vasilyevea enhydrum, strain 9b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.