STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ85789.1comF family protein. (267 aa)    
Predicted Functional Partners:
SFZ81964.1
DNA processing protein.
 
 
 0.947
SFZ80988.1
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.872
SFZ82063.1
Competence protein ComEC.
 
  
 0.867
SFZ84983.1
Magnesium chelatase family protein.
 
  
 0.819
SFZ81449.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.798
SFZ85743.1
Cyclohexadieny/prephenate dehydrogenase.
   
  
 0.776
SFZ81523.1
Flagellar motility protein MotE, a chaperone for MotC folding.
   
    0.770
SFZ80767.1
Lipopolysaccharide transport system ATP-binding protein; Manually curated.
   
    0.699
SFZ81912.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
    0.691
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.668
Your Current Organism:
Devosia enhydra
NCBI taxonomy Id: 665118
Other names: ATCC 23634, D. enhydra, JCM 21106, NBRC 102409, Prosthecomicrobium enhydrum, Vasilyevaea enhydra, Vasilyevea enhydrum, strain 9b
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