Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFZ80767.1 | SFZ85789.1 | SAMN02983003_0115 | SAMN02983003_2959 | Lipopolysaccharide transport system ATP-binding protein; Manually curated. | comF family protein. | 0.699 |
SFZ80988.1 | SFZ81912.1 | SAMN02983003_0247 | SAMN02983003_0772 | DNA repair protein RadC; Belongs to the UPF0758 family. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.419 |
SFZ80988.1 | SFZ81964.1 | SAMN02983003_0247 | SAMN02983003_0805 | DNA repair protein RadC; Belongs to the UPF0758 family. | DNA processing protein. | 0.670 |
SFZ80988.1 | SFZ82063.1 | SAMN02983003_0247 | SAMN02983003_0859 | DNA repair protein RadC; Belongs to the UPF0758 family. | Competence protein ComEC. | 0.675 |
SFZ80988.1 | SFZ85789.1 | SAMN02983003_0247 | SAMN02983003_2959 | DNA repair protein RadC; Belongs to the UPF0758 family. | comF family protein. | 0.872 |
SFZ81449.1 | SFZ81523.1 | SAMN02983003_0506 | SAMN02983003_0545 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.974 |
SFZ81449.1 | SFZ81912.1 | SAMN02983003_0506 | SAMN02983003_0772 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.843 |
SFZ81449.1 | SFZ81964.1 | SAMN02983003_0506 | SAMN02983003_0805 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | DNA processing protein. | 0.466 |
SFZ81449.1 | SFZ85789.1 | SAMN02983003_0506 | SAMN02983003_2959 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | comF family protein. | 0.798 |
SFZ81523.1 | SFZ81449.1 | SAMN02983003_0545 | SAMN02983003_0506 | Flagellar motility protein MotE, a chaperone for MotC folding. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.974 |
SFZ81523.1 | SFZ81912.1 | SAMN02983003_0545 | SAMN02983003_0772 | Flagellar motility protein MotE, a chaperone for MotC folding. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.812 |
SFZ81523.1 | SFZ81964.1 | SAMN02983003_0545 | SAMN02983003_0805 | Flagellar motility protein MotE, a chaperone for MotC folding. | DNA processing protein. | 0.563 |
SFZ81523.1 | SFZ85789.1 | SAMN02983003_0545 | SAMN02983003_2959 | Flagellar motility protein MotE, a chaperone for MotC folding. | comF family protein. | 0.770 |
SFZ81912.1 | SFZ80988.1 | SAMN02983003_0772 | SAMN02983003_0247 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.419 |
SFZ81912.1 | SFZ81449.1 | SAMN02983003_0772 | SAMN02983003_0506 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.843 |
SFZ81912.1 | SFZ81523.1 | SAMN02983003_0772 | SAMN02983003_0545 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Flagellar motility protein MotE, a chaperone for MotC folding. | 0.812 |
SFZ81912.1 | SFZ81964.1 | SAMN02983003_0772 | SAMN02983003_0805 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | DNA processing protein. | 0.618 |
SFZ81912.1 | SFZ82063.1 | SAMN02983003_0772 | SAMN02983003_0859 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Competence protein ComEC. | 0.445 |
SFZ81912.1 | SFZ85789.1 | SAMN02983003_0772 | SAMN02983003_2959 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | comF family protein. | 0.691 |
SFZ81964.1 | SFZ80988.1 | SAMN02983003_0805 | SAMN02983003_0247 | DNA processing protein. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.670 |
page 1 of 3