STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFZ85919.1Sarcosine oxidase subunit beta. (389 aa)    
Predicted Functional Partners:
SFZ86654.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.925
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.883
SFZ86251.1
5-aminolevulinate synthase.
    
  0.877
SFZ84790.1
Sarcosine oxidase.
  
  
 
0.867
SFZ86110.1
Aminomethyltransferase.
 
 0.771
SFZ85862.1
Sarcosine oxidase subunit alpha.
 
 
 0.767
SFZ85918.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
       0.737
SFZ86874.1
Sulfide dehydrogenase (flavocytochrome c), flavoprotein subunit.
   
 0.737
SFZ82289.1
Aspartate aminotransferase.
  
  
  0.720
SFZ84713.1
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.702
Your Current Organism:
Devosia enhydra
NCBI taxonomy Id: 665118
Other names: ATCC 23634, D. enhydra, JCM 21106, NBRC 102409, Prosthecomicrobium enhydrum, Vasilyevaea enhydra, Vasilyevea enhydrum, strain 9b
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