KPL50979.1 protein (Prosthecomicrobium hirschii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KPL50979.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (862 aa)

Predicted Functional Partners:

KPL50925.1

0.999

KPL52787.1

0.997

KPL52450.1

0.996

KPL50942.1

0.992

KPL51705.1

0.992

KPL54636.1

0.989

KPL53673.1

0.986

ABB55_12415

0.982

KPL54739.1

0.967

KPL55058.1

0.963

Your Current Organism:

Prosthecomicrobium hirschii

NCBI taxonomy Id: 665126
Other names: ATCC 27832, P. hirschii

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABB55_12415	KPL50925.1	ABB55_12415	ABB55_00695	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ABB55_12415	KPL50942.1	ABB55_12415	ABB55_00805	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ABB55_12415	KPL50979.1	ABB55_12415	ABB55_01020	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
ABB55_12415	KPL51705.1	ABB55_12415	ABB55_05230	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ABB55_12415	KPL52450.1	ABB55_12415	ABB55_09625	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ABB55_12415	KPL52787.1	ABB55_12415	ABB55_11665	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ABB55_12415	KPL53673.1	ABB55_12415	ABB55_16835	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
ABB55_12415	KPL54636.1	ABB55_12415	ABB55_22395	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
ABB55_12415	KPL54739.1	ABB55_12415	ABB55_23020	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
ABB55_12415	KPL55058.1	ABB55_12415	ABB55_24875	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
KPL50925.1	ABB55_12415	ABB55_00695	ABB55_12415	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KPL50925.1	KPL50942.1	ABB55_00695	ABB55_00805	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KPL50925.1	KPL50979.1	ABB55_00695	ABB55_01020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KPL50925.1	KPL51705.1	ABB55_00695	ABB55_05230	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KPL50925.1	KPL52450.1	ABB55_00695	ABB55_09625	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KPL50925.1	KPL52787.1	ABB55_00695	ABB55_11665	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KPL50925.1	KPL53673.1	ABB55_00695	ABB55_16835	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KPL50925.1	KPL54636.1	ABB55_00695	ABB55_22395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KPL50925.1	KPL54739.1	ABB55_00695	ABB55_23020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KPL50925.1	KPL55058.1	ABB55_00695	ABB55_24875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999