Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KPL52195.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (523 aa)    
Predicted Functional Partners:
KPL54949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
  
 0.827
KPL53254.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.813
KPL52314.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.572
KPL50889.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.460
KPL50890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.460
KPL50891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.460
KPL50957.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.460
KPL51455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.460
KPL51457.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.460
KPL52348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.460
Your Current Organism:
Prosthecomicrobium hirschii
NCBI taxonomy Id: 665126
Other names: ATCC 27832, P. hirschii
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