STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL55829.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)    
Predicted Functional Partners:
KPL52735.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
KPL52734.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
KPL56050.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.987
KPL55369.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.986
KPL53489.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.984
KPL55368.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
KPL54424.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.966
KPL54059.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.723
KPL51949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.630
KPL52733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.598
Your Current Organism:
Prosthecomicrobium hirschii
NCBI taxonomy Id: 665126
Other names: ATCC 27832, P. hirschii
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