KPL54261.1 protein (Prosthecomicrobium hirschii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KPL54261.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)

Predicted Functional Partners:

KPL51580.1

0.772

KPL54251.1

0.772

ABB55_03570

0.762

KPL52154.1

0.762

KPL55449.1

0.760

KPL54387.1

0.759

KPL55056.1

0.759

KPL52147.1

0.758

KPL52459.1

0.750

KPL55098.1

0.748

Your Current Organism:

Prosthecomicrobium hirschii

NCBI taxonomy Id: 665126
Other names: ATCC 27832, P. hirschii

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABB55_03570	KPL51580.1	ABB55_03570	ABB55_04510	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
ABB55_03570	KPL52147.1	ABB55_03570	ABB55_07840	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765
ABB55_03570	KPL52154.1	ABB55_03570	ABB55_07875	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.739
ABB55_03570	KPL52459.1	ABB55_03570	ABB55_09680	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ABB55_03570	KPL54251.1	ABB55_03570	ABB55_20215	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Invasion associated locus B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.616
ABB55_03570	KPL54261.1	ABB55_03570	ABB55_20265	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ABB55_03570	KPL55056.1	ABB55_03570	ABB55_24865	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.620
ABB55_03570	KPL55098.1	ABB55_03570	ABB55_25095	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.687
ABB55_03570	KPL55449.1	ABB55_03570	ABB55_27085	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
KPL51580.1	ABB55_03570	ABB55_04510	ABB55_03570	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
KPL51580.1	KPL52147.1	ABB55_04510	ABB55_07840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
KPL51580.1	KPL52154.1	ABB55_04510	ABB55_07875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
KPL51580.1	KPL52459.1	ABB55_04510	ABB55_09680	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KPL51580.1	KPL54251.1	ABB55_04510	ABB55_20215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Invasion associated locus B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KPL51580.1	KPL54261.1	ABB55_04510	ABB55_20265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.772
KPL51580.1	KPL54387.1	ABB55_04510	ABB55_20995	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KPL51580.1	KPL55056.1	ABB55_04510	ABB55_24865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
KPL51580.1	KPL55098.1	ABB55_04510	ABB55_25095	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KPL51580.1	KPL55449.1	ABB55_04510	ABB55_27085	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KPL52147.1	ABB55_03570	ABB55_07840	ABB55_03570	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765