STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL54940.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
KPL54942.1
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.
 
  0.990
KPL50925.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.979
KPL52450.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.968
ABB55_12415
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.968
KPL50942.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.967
KPL51705.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.967
KPL52787.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.967
KPL54939.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.951
KPL55626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.910
KPL52880.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.894
Your Current Organism:
Prosthecomicrobium hirschii
NCBI taxonomy Id: 665126
Other names: ATCC 27832, P. hirschii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.