STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL55475.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)    
Predicted Functional Partners:
KPL56163.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.983
KPL54512.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.976
KPL55476.1
Peptidase U35; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.948
KPL55478.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.933
KPL55307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.927
KPL54511.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.896
KPL55479.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.876
KPL55480.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.835
KPL54515.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.819
KPL54520.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.818
Your Current Organism:
Prosthecomicrobium hirschii
NCBI taxonomy Id: 665126
Other names: ATCC 27832, P. hirschii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.