STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB30085.1Predicted dehydrogenase. (388 aa)    
Predicted Functional Partners:
SDB30065.1
Inosose dehydratase.
 
 
  0.891
SDB30103.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.807
SDB24369.1
Predicted dehydrogenase.
  
 
  0.790
SDB30092.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-).
  
    0.774
SDB30114.1
Quinol monooxygenase YgiN.
       0.773
SDB30072.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-).
 
     0.733
SDB23983.1
Predicted dehydrogenase.
  
     0.661
SDB54743.1
Sugar phosphate isomerase/epimerase.
  
 
  0.647
SDB30390.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
  
    0.625
SDB35712.1
Sugar phosphate isomerase/epimerase.
  
 
  0.625
Your Current Organism:
Bauldia litoralis
NCBI taxonomy Id: 665467
Other names: ATCC 35022, B. litoralis, NCIB 2233, NCIB:2233, Prosthecomicrobium litoralum, strain 524-16
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