STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB36648.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (441 aa)    
Predicted Functional Partners:
SDB36655.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
  0.932
SDB36663.1
Multiple sugar transport system permease protein.
 
  0.932
SDB36667.1
Hypothetical protein.
 
     0.889
SDB36678.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.882
SDB36680.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.867
SDB07915.1
Multiple sugar transport system permease protein.
  
  0.857
SDB07923.1
Multiple sugar transport system permease protein.
  
  0.762
SDB36694.1
Dihydroxyacetone kinase, phosphotransfer subunit.
 
     0.625
SDB36689.1
Dihydroxyacetone kinase DhaL subunit.
 
     0.590
SDB54689.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
  
  0.539
Your Current Organism:
Bauldia litoralis
NCBI taxonomy Id: 665467
Other names: ATCC 35022, B. litoralis, NCIB 2233, NCIB:2233, Prosthecomicrobium litoralum, strain 524-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.