Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDB14202.1 | SDB14213.1 | SAMN02982931_01080 | SAMN02982931_01081 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Uncharacterized membrane protein. | 0.932 |
SDB14202.1 | SDB14301.1 | SAMN02982931_01080 | SAMN02982931_01089 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.992 |
SDB14202.1 | SDB44732.1 | SAMN02982931_01080 | SAMN02982931_03417 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Ureidoglycolate hydrolase. | 0.893 |
SDB14202.1 | ureA | SAMN02982931_01080 | SAMN02982931_01989 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Urease subunit gamma; Belongs to the urease gamma subunit family. | 0.565 |
SDB14202.1 | ureB | SAMN02982931_01080 | SAMN02982931_01991 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Urease subunit beta; Belongs to the urease beta subunit family. | 0.563 |
SDB14202.1 | ureC | SAMN02982931_01080 | SAMN02982931_01993 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | Urease subunit alpha. | 0.633 |
SDB14213.1 | SDB14202.1 | SAMN02982931_01081 | SAMN02982931_01080 | Uncharacterized membrane protein. | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | 0.932 |
SDB14213.1 | SDB14301.1 | SAMN02982931_01081 | SAMN02982931_01089 | Uncharacterized membrane protein. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.876 |
SDB14213.1 | SDB44732.1 | SAMN02982931_01081 | SAMN02982931_03417 | Uncharacterized membrane protein. | Ureidoglycolate hydrolase. | 0.723 |
SDB14301.1 | SDB14202.1 | SAMN02982931_01089 | SAMN02982931_01080 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | 0.992 |
SDB14301.1 | SDB14213.1 | SAMN02982931_01089 | SAMN02982931_01081 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Uncharacterized membrane protein. | 0.876 |
SDB14301.1 | SDB44732.1 | SAMN02982931_01089 | SAMN02982931_03417 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Ureidoglycolate hydrolase. | 0.495 |
SDB34201.1 | SDB44732.1 | SAMN02982931_02523 | SAMN02982931_03417 | Malate synthase; Belongs to the malate synthase family. | Ureidoglycolate hydrolase. | 0.651 |
SDB34201.1 | SDB53481.1 | SAMN02982931_02523 | SAMN02982931_04238 | Malate synthase; Belongs to the malate synthase family. | Isocitrate lyase. | 0.999 |
SDB44726.1 | SDB44732.1 | SAMN02982931_03416 | SAMN02982931_03417 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | Ureidoglycolate hydrolase. | 0.581 |
SDB44726.1 | SDB44743.1 | SAMN02982931_03416 | SAMN02982931_03418 | Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. | Threonine/homoserine/homoserine lactone efflux protein. | 0.417 |
SDB44732.1 | SDB14202.1 | SAMN02982931_03417 | SAMN02982931_01080 | Ureidoglycolate hydrolase. | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. | 0.893 |
SDB44732.1 | SDB14213.1 | SAMN02982931_03417 | SAMN02982931_01081 | Ureidoglycolate hydrolase. | Uncharacterized membrane protein. | 0.723 |
SDB44732.1 | SDB14301.1 | SAMN02982931_03417 | SAMN02982931_01089 | Ureidoglycolate hydrolase. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.495 |
SDB44732.1 | SDB34201.1 | SAMN02982931_03417 | SAMN02982931_02523 | Ureidoglycolate hydrolase. | Malate synthase; Belongs to the malate synthase family. | 0.651 |
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