STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB55064.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
SDB36083.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
     
 0.690
SDB55073.1
Hypothetical protein.
 
     0.634
SDB07772.1
Beta-mannosidase.
   
 0.613
SDB50739.1
Hypothetical protein.
   
 
 0.601
SDB59212.1
Hypothetical protein.
   
 
 0.601
SDB55045.1
Hypothetical protein.
 
    
0.577
SDB58425.1
Hypothetical protein.
  
 
 0.560
SDB56186.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.548
SDB36794.1
Threonine dehydrogenase.
   
 
  0.527
SDB50822.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.521
Your Current Organism:
Bauldia litoralis
NCBI taxonomy Id: 665467
Other names: ATCC 35022, B. litoralis, NCIB 2233, NCIB:2233, Prosthecomicrobium litoralum, strain 524-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.