STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000316095_00806Unannotated protein. (344 aa)    
Predicted Functional Partners:
GCA_000316095_05503
Unannotated protein.
     
 0.999
GCA_000316095_01819
Unannotated protein.
   
 0.998
GCA_000316095_00807
Unannotated protein.
 
     0.942
GCA_000316095_00812
Unannotated protein.
 
 0.924
GCA_000316095_00813
Unannotated protein.
 
 0.921
GCA_000316095_01234
Unannotated protein.
 
 0.919
GCA_000316095_01233
Unannotated protein.
 
 0.917
GCA_000316095_01194
Unannotated protein.
  
 
  0.909
GCA_000316095_06194
Unannotated protein.
   
 0.874
GCA_000316095_01542
Unannotated protein.
 
 0.852
Your Current Organism:
Streptomyces viridosporus
NCBI taxonomy Id: 665577
Other names: S. viridosporus T7A, Streptomyces viridosporus ATCC 39115, Streptomyces viridosporus T7A, Streptomyces viridosporus str. T7A, Streptomyces viridosporus strain T7A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.