STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000316095_02788Unannotated protein. (130 aa)    
Predicted Functional Partners:
GCA_000316095_02789
Unannotated protein.
 
     0.911
GCA_000316095_02787
Unannotated protein.
       0.807
GCA_000316095_01282
Unannotated protein.
  
     0.773
GCA_000316095_02786
Unannotated protein.
       0.773
GCA_000316095_07436
Unannotated protein.
  
     0.720
GCA_000316095_00658
Unannotated protein.
   
    0.711
GCA_000316095_05787
Unannotated protein.
  
     0.691
GCA_000316095_02792
Unannotated protein.
  
    0.410
GCA_000316095_04175
Unannotated protein.
   
    0.408
GCA_000316095_04203
Unannotated protein.
   
    0.408
Your Current Organism:
Streptomyces viridosporus
NCBI taxonomy Id: 665577
Other names: S. viridosporus T7A, Streptomyces viridosporus ATCC 39115, Streptomyces viridosporus T7A, Streptomyces viridosporus str. T7A, Streptomyces viridosporus strain T7A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.