STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000316095_03872Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_000316095_03871
Unannotated protein.
 
   
 0.981
GCA_000316095_03873
Unannotated protein.
 
     0.920
GCA_000316095_03874
Unannotated protein.
       0.767
GCA_000316095_03870
Unannotated protein.
       0.646
GCA_000316095_02370
Unannotated protein.
  
     0.601
GCA_000316095_03075
Unannotated protein.
  
     0.599
GCA_000316095_04817
Unannotated protein.
  
     0.546
GCA_000316095_07304
Unannotated protein.
  
     0.536
GCA_000316095_03173
Unannotated protein.
  
     0.502
GCA_000316095_00988
Unannotated protein.
  
     0.487
Your Current Organism:
Streptomyces viridosporus
NCBI taxonomy Id: 665577
Other names: S. viridosporus T7A, Streptomyces viridosporus ATCC 39115, Streptomyces viridosporus T7A, Streptomyces viridosporus str. T7A, Streptomyces viridosporus strain T7A
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.