STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000316095_04480Unannotated protein. (318 aa)    
Predicted Functional Partners:
GCA_000316095_04481
Unannotated protein.
       0.779
GCA_000316095_04482
Unannotated protein.
       0.713
GCA_000316095_04483
Unannotated protein.
       0.713
GCA_000316095_04484
Unannotated protein.
       0.680
GCA_000316095_04487
Unannotated protein.
 
     0.677
GCA_000316095_04446
Unannotated protein.
  
     0.676
GCA_000316095_04745
Unannotated protein.
  
     0.671
GCA_000316095_03664
Unannotated protein.
  
     0.639
GCA_000316095_04485
Unannotated protein.
       0.636
GCA_000316095_05270
Unannotated protein.
  
     0.625
Your Current Organism:
Streptomyces viridosporus
NCBI taxonomy Id: 665577
Other names: S. viridosporus T7A, Streptomyces viridosporus ATCC 39115, Streptomyces viridosporus T7A, Streptomyces viridosporus str. T7A, Streptomyces viridosporus strain T7A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.