STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000316095_04614Unannotated protein. (443 aa)    
Predicted Functional Partners:
GCA_000316095_02495
Unannotated protein.
    
  0.898
GCA_000316095_04484
Unannotated protein.
   
 
  0.897
GCA_000316095_04616
Unannotated protein.
 
   
 0.850
GCA_000316095_05679
Unannotated protein.
    
  0.836
GCA_000316095_01980
Unannotated protein.
    
  0.827
GCA_000316095_04615
Unannotated protein.
       0.753
GCA_000316095_04585
Unannotated protein.
 
   
 0.730
GCA_000316095_04611
Unannotated protein.
       0.726
GCA_000316095_04612
Unannotated protein.
       0.671
GCA_000316095_04613
Unannotated protein.
       0.671
Your Current Organism:
Streptomyces viridosporus
NCBI taxonomy Id: 665577
Other names: S. viridosporus T7A, Streptomyces viridosporus ATCC 39115, Streptomyces viridosporus T7A, Streptomyces viridosporus str. T7A, Streptomyces viridosporus strain T7A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.