STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000316095_06068Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_000316095_06067
Unannotated protein.
 
 
0.999
GCA_000316095_04633
Unannotated protein.
 
 
 0.997
GCA_000316095_07318
Unannotated protein.
 
0.985
GCA_000316095_01316
Unannotated protein.
 0.979
GCA_000316095_01318
Unannotated protein.
  
  0.974
GCA_000316095_01327
Unannotated protein.
 
 
   0.974
GCA_000316095_04714
Unannotated protein.
 
 0.973
GCA_000316095_01330
Unannotated protein.
 
 0.966
GCA_000316095_06066
Unannotated protein.
  
 0.947
GCA_000316095_00103
Unannotated protein.
 
 0.942
Your Current Organism:
Streptomyces viridosporus
NCBI taxonomy Id: 665577
Other names: S. viridosporus T7A, Streptomyces viridosporus ATCC 39115, Streptomyces viridosporus T7A, Streptomyces viridosporus str. T7A, Streptomyces viridosporus strain T7A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.