STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2R0G2_COCSNUncharacterized protein. (307 aa)    
Predicted Functional Partners:
M2SZQ3_COCSN
FYVE-type domain-containing protein.
   
 0.877
M2SRG1_COCSN
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.794
M2RBC5_COCSN
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.689
M2T1Q2_COCSN
Vps8 domain-containing protein.
    
 
 0.688
M2SQQ0_COCSN
Uncharacterized protein.
    
 0.682
M2R0C9_COCSN
VPS9 domain-containing protein.
    
 0.681
M2TJ12_COCSN
Uncharacterized protein.
    
 0.677
M2RX12_COCSN
MBOAT_2 domain-containing protein.
    
 0.647
M2RLY3_COCSN
Pep3_Vps18 domain-containing protein.
    
 
 0.644
M2SNR9_COCSN
Phosphatidylinositol 3-kinase VPS34.
    
 
 0.626
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.