STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2R1B4_COCSNUncharacterized protein. (2287 aa)    
Predicted Functional Partners:
M2SLT9_COCSN
Uncharacterized protein.
    
 0.999
M2SXK8_COCSN
Uncharacterized protein.
    
 0.999
M2RPZ3_COCSN
Endo/exonuclease/phosphatase domain-containing protein.
   
 0.998
M2SSB0_COCSN
Uncharacterized protein.
    
 0.998
M2SYS4_COCSN
Uncharacterized protein.
   
 0.998
M2T383_COCSN
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.987
M2T1S3_COCSN
NOT2_3_5 domain-containing protein.
   
 0.968
M2T7B9_COCSN
CUE domain-containing protein.
   
 0.953
M2RTD0_COCSN
PAT1 domain-containing protein.
    
 
 0.915
M2T5H2_COCSN
HECT domain-containing protein.
   
  
 0.829
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.