STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2R4M0_COCSNUncharacterized protein. (508 aa)    
Predicted Functional Partners:
M2T1F6_COCSN
Brix domain-containing protein.
   
 
 0.931
M2SDT4_COCSN
TRASH domain-containing protein.
   
 
 0.918
M2T6X6_COCSN
Uncharacterized protein.
   
 
 0.863
M2S8F2_COCSN
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.861
M2SBV2_COCSN
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.836
M2RDQ5_COCSN
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.831
M2SY03_COCSN
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
  
 0.805
M2TCN1_COCSN
Uncharacterized protein.
   
   0.802
M2SZT7_COCSN
Uncharacterized protein.
   
 
 0.801
M2R358_COCSN
CP-type G domain-containing protein.
   
  
 0.799
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.