M2RF91_COCSN protein (Bipolaris sorokiniana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M2RF91_COCSN

Uncharacterized protein; Belongs to the complex I LYR family. (113 aa)

Predicted Functional Partners:

M2QVC9_COCSN

0.999

M2SH42_COCSN

0.995

M2TL02_COCSN

0.995

M2RW71_COCSN

0.941

M2RIN7_COCSN

0.940

M2SIR0_COCSN

0.930

M2R9U4_COCSN

0.875

M2S5A1_COCSN

0.875

M2SW89_COCSN

0.875

M2SYB8_COCSN

0.865

Your Current Organism:

Bipolaris sorokiniana

NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2QVC9_COCSN	M2RF91_COCSN	M2QVC9	M2RF91	Aminotran_5 domain-containing protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999
M2QVC9_COCSN	M2RIN7_COCSN	M2QVC9	M2RIN7	Aminotran_5 domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.727
M2QVC9_COCSN	M2SH42_COCSN	M2QVC9	M2SH42	Aminotran_5 domain-containing protein.	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.999
M2QVC9_COCSN	M2SIR0_COCSN	M2QVC9	M2SIR0	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.704
M2QVC9_COCSN	M2SYB8_COCSN	M2QVC9	M2SYB8	Aminotran_5 domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.924
M2QVC9_COCSN	M2TL02_COCSN	M2QVC9	M2TL02	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.997
M2R9U4_COCSN	M2RF91_COCSN	M2R9U4	M2RF91	Aminotran_5 domain-containing protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.875
M2R9U4_COCSN	M2RIN7_COCSN	M2R9U4	M2RIN7	Aminotran_5 domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.620
M2R9U4_COCSN	M2SH42_COCSN	M2R9U4	M2SH42	Aminotran_5 domain-containing protein.	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.962
M2R9U4_COCSN	M2SIR0_COCSN	M2R9U4	M2SIR0	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.704
M2R9U4_COCSN	M2SYB8_COCSN	M2R9U4	M2SYB8	Aminotran_5 domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.620
M2R9U4_COCSN	M2TL02_COCSN	M2R9U4	M2TL02	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.727
M2RF91_COCSN	M2QVC9_COCSN	M2RF91	M2QVC9	Uncharacterized protein; Belongs to the complex I LYR family.	Aminotran_5 domain-containing protein.	0.999
M2RF91_COCSN	M2R9U4_COCSN	M2RF91	M2R9U4	Uncharacterized protein; Belongs to the complex I LYR family.	Aminotran_5 domain-containing protein.	0.875
M2RF91_COCSN	M2RIN7_COCSN	M2RF91	M2RIN7	Uncharacterized protein; Belongs to the complex I LYR family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.940
M2RF91_COCSN	M2RW71_COCSN	M2RF91	M2RW71	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.941
M2RF91_COCSN	M2S5A1_COCSN	M2RF91	M2S5A1	Uncharacterized protein; Belongs to the complex I LYR family.	Aminotran_5 domain-containing protein.	0.875
M2RF91_COCSN	M2SH42_COCSN	M2RF91	M2SH42	Uncharacterized protein; Belongs to the complex I LYR family.	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.995
M2RF91_COCSN	M2SIR0_COCSN	M2RF91	M2SIR0	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.930
M2RF91_COCSN	M2SW89_COCSN	M2RF91	M2SW89	Uncharacterized protein; Belongs to the complex I LYR family.	Aminotran_5 domain-containing protein.	0.875