STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2RLV5_COCSNE3 ubiquitin protein ligase. (727 aa)    
Predicted Functional Partners:
M2THX5_COCSN
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.998
M2THB6_COCSN
Histone H2B; Belongs to the histone H2B family.
    
 0.898
M2T675_COCSN
CDC73_C domain-containing protein.
   
 0.859
M2SW42_COCSN
Uncharacterized protein.
    
 0.834
M2SZ89_COCSN
Uncharacterized protein.
   
 0.815
M2SRL1_COCSN
Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
 
 0.813
M2S3G8_COCSN
Uncharacterized protein.
   
 0.808
M2R2E6_COCSN
Uncharacterized protein.
   
 0.749
M2SW73_COCSN
Uncharacterized protein.
    
 0.733
M2RN01_COCSN
Plus3 domain-containing protein.
   
 0.700
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
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