STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2RMX8_COCSNVacuolar protein sorting-associated protein; May be involved in recycling of membrane proteins between an endocytic compartment and the TGN; Belongs to the VPS13 family. (3197 aa)    
Predicted Functional Partners:
M2T066_COCSN
Uncharacterized protein.
    
 
 0.695
M2SW12_COCSN
DUF1691 domain-containing protein.
    
 
 0.679
M2SVD7_COCSN
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.637
M2RX99_COCSN
Uncharacterized protein.
   
  
 0.624
M2SHU2_COCSN
Uncharacterized protein.
   
  
 0.588
M2T8G4_COCSN
ABC transporter domain-containing protein.
      
 0.542
M2TMS4_COCSN
Glycoside hydrolase family 30 protein; Belongs to the glycosyl hydrolase 30 family.
      
 0.537
M2TJG9_COCSN
CNH domain-containing protein.
   
 
 0.529
M2TDG6_COCSN
UBA domain-containing protein.
    
 
 0.526
M2SYV5_COCSN
SAC domain-containing protein.
    
 
 0.516
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
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