STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2SA66_COCSNVelvet domain-containing protein. (599 aa)    
Predicted Functional Partners:
M2SCZ5_COCSN
SCD domain-containing protein.
   
 0.930
M2T3E4_COCSN
Uncharacterized protein.
   
 0.857
M2RFL3_COCSN
Uncharacterized protein.
   
 0.779
M2RFY9_COCSN
Structural maintenance of chromosomes protein.
   
 0.779
M2RIE3_COCSN
Uncharacterized protein.
   
 0.762
M2T465_COCSN
Rad21_Rec8_N domain-containing protein.
   
 0.762
M2SPH7_COCSN
SMC_N domain-containing protein.
   
 0.713
M2QZ55_COCSN
UmuC domain-containing protein.
   
 
 0.654
M2RPJ4_COCSN
Uncharacterized protein.
   
 
 0.654
M2RQK3_COCSN
Structural maintenance of chromosomes protein.
   
 0.628
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
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