M2SKD4_COCSN protein (Bipolaris sorokiniana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M2SKD4_COCSN

ABC transporter domain-containing protein. (630 aa)

Predicted Functional Partners:

M2S9S1_COCSN

0.625

M2S7V4_COCSN

0.607

M2SL95_COCSN

0.599

M2TKH2_COCSN

0.583

M2RF22_COCSN

0.549

M2SZZ2_COCSN

0.479

M2TK70_COCSN

0.459

M2RBS1_COCSN

0.452

M2T1Z7_COCSN

0.434

Your Current Organism:

Bipolaris sorokiniana

NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2RBS1_COCSN	M2RF22_COCSN	M2RBS1	M2RF22	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ATP-synt_DE_N domain-containing protein.	0.999
M2RBS1_COCSN	M2S7V4_COCSN	M2RBS1	M2S7V4	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
M2RBS1_COCSN	M2S9S1_COCSN	M2RBS1	M2S9S1	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
M2RBS1_COCSN	M2SKD4_COCSN	M2RBS1	M2SKD4	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ABC transporter domain-containing protein.	0.452
M2RBS1_COCSN	M2SL95_COCSN	M2RBS1	M2SL95	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	ATP synthase subunit gamma.	0.999
M2RBS1_COCSN	M2T1Z7_COCSN	M2RBS1	M2T1Z7	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	Uncharacterized protein.	0.999
M2RF22_COCSN	M2RBS1_COCSN	M2RF22	M2RBS1	ATP-synt_DE_N domain-containing protein.	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	0.999
M2RF22_COCSN	M2S7V4_COCSN	M2RF22	M2S7V4	ATP-synt_DE_N domain-containing protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
M2RF22_COCSN	M2S9S1_COCSN	M2RF22	M2S9S1	ATP-synt_DE_N domain-containing protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
M2RF22_COCSN	M2SKD4_COCSN	M2RF22	M2SKD4	ATP-synt_DE_N domain-containing protein.	ABC transporter domain-containing protein.	0.549
M2RF22_COCSN	M2SL95_COCSN	M2RF22	M2SL95	ATP-synt_DE_N domain-containing protein.	ATP synthase subunit gamma.	0.999
M2RF22_COCSN	M2T1Z7_COCSN	M2RF22	M2T1Z7	ATP-synt_DE_N domain-containing protein.	Uncharacterized protein.	0.999
M2S7V4_COCSN	M2RBS1_COCSN	M2S7V4	M2RBS1	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	0.999
M2S7V4_COCSN	M2RF22_COCSN	M2S7V4	M2RF22	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_DE_N domain-containing protein.	0.999
M2S7V4_COCSN	M2S9S1_COCSN	M2S7V4	M2S9S1	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
M2S7V4_COCSN	M2SKD4_COCSN	M2S7V4	M2SKD4	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ABC transporter domain-containing protein.	0.607
M2S7V4_COCSN	M2SL95_COCSN	M2S7V4	M2SL95	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
M2S7V4_COCSN	M2T1Z7_COCSN	M2S7V4	M2T1Z7	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.999
M2S9S1_COCSN	M2RBS1_COCSN	M2S9S1	M2RBS1	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	0.999
M2S9S1_COCSN	M2RF22_COCSN	M2S9S1	M2RF22	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_DE_N domain-containing protein.	0.999