STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2SKG9_COCSNUncharacterized protein. (440 aa)    
Predicted Functional Partners:
M2RSI0_COCSN
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.786
M2TDS3_COCSN
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.786
M2S1K5_COCSN
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 
 0.615
M2SVU6_COCSN
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.595
M2T6V0_COCSN
PseudoU_synth_1 domain-containing protein.
  
 
 0.575
TSR3
Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family.
   
  
 0.567
M2SV66_COCSN
Uncharacterized protein.
   
  
0.550
M2SXG8_COCSN
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.526
M2RV90_COCSN
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
  
 
 0.516
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
 
 0.509
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.