STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2SQX9_COCSNPUM-HD domain-containing protein. (765 aa)    
Predicted Functional Partners:
M2SYS4_COCSN
Uncharacterized protein.
    
 
 0.727
M2T383_COCSN
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.506
M2SWA9_COCSN
PUM-HD domain-containing protein.
    
 
 0.482
M2RPZ3_COCSN
Endo/exonuclease/phosphatase domain-containing protein.
   
 
 0.445
M2T5H2_COCSN
HECT domain-containing protein.
   
   0.429
M2RFM9_COCSN
Uncharacterized protein.
    
 
 0.424
M2TBW7_COCSN
AD domain-containing protein.
    
   0.414
M2T126_COCSN
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.408
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.