M2SWJ9_COCSN protein (Bipolaris sorokiniana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M2SWJ9_COCSN

Uncharacterized protein. (265 aa)

Predicted Functional Partners:

M2SYK9_COCSN

0.645

M2TBF6_COCSN

0.570

EFM4

0.561

M2T7Y8_COCSN

0.477

M2T3W4_COCSN

0.465

M2R522_COCSN

0.403

Your Current Organism:

Bipolaris sorokiniana

NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFM4	M2SWJ9_COCSN	M2SDU7	M2SWJ9	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Uncharacterized protein.	0.561
EFM4	M2T3W4_COCSN	M2SDU7	M2T3W4	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	N-acetyltransferase domain-containing protein.	0.485
M2R522_COCSN	M2SWJ9_COCSN	M2R522	M2SWJ9	Uncharacterized protein.	Uncharacterized protein.	0.403
M2R522_COCSN	M2SYK9_COCSN	M2R522	M2SYK9	Uncharacterized protein.	Uncharacterized protein.	0.650
M2SWJ9_COCSN	EFM4	M2SWJ9	M2SDU7	Uncharacterized protein.	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.561
M2SWJ9_COCSN	M2R522_COCSN	M2SWJ9	M2R522	Uncharacterized protein.	Uncharacterized protein.	0.403
M2SWJ9_COCSN	M2SYK9_COCSN	M2SWJ9	M2SYK9	Uncharacterized protein.	Uncharacterized protein.	0.645
M2SWJ9_COCSN	M2T3W4_COCSN	M2SWJ9	M2T3W4	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.465
M2SWJ9_COCSN	M2T7Y8_COCSN	M2SWJ9	M2T7Y8	Uncharacterized protein.	Uncharacterized protein.	0.477
M2SWJ9_COCSN	M2TBF6_COCSN	M2SWJ9	M2TBF6	Uncharacterized protein.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.570
M2SYK9_COCSN	M2R522_COCSN	M2SYK9	M2R522	Uncharacterized protein.	Uncharacterized protein.	0.650
M2SYK9_COCSN	M2SWJ9_COCSN	M2SYK9	M2SWJ9	Uncharacterized protein.	Uncharacterized protein.	0.645
M2T3W4_COCSN	EFM4	M2T3W4	M2SDU7	N-acetyltransferase domain-containing protein.	Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.485
M2T3W4_COCSN	M2SWJ9_COCSN	M2T3W4	M2SWJ9	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.465
M2T7Y8_COCSN	M2SWJ9_COCSN	M2T7Y8	M2SWJ9	Uncharacterized protein.	Uncharacterized protein.	0.477
M2TBF6_COCSN	M2SWJ9_COCSN	M2TBF6	M2SWJ9	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	Uncharacterized protein.	0.570