M2T2B6_COCSN protein (Bipolaris sorokiniana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

M2T2B6_COCSN

Uncharacterized protein. (294 aa)

Predicted Functional Partners:

M2S7X1_COCSN

0.814

M2SVY6_COCSN

0.809

M2SZ51_COCSN

0.805

M2SNU6_COCSN

0.804

M2TGE3_COCSN

0.804

M2SUQ0_COCSN

0.803

M2RJ87_COCSN

0.802

M2R8D5_COCSN

0.800

M2RG95_COCSN

0.800

M2TI25_COCSN

0.800

Your Current Organism:

Bipolaris sorokiniana

NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M2R8D5_COCSN	M2RG95_COCSN	M2R8D5	M2RG95	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
M2R8D5_COCSN	M2RJ87_COCSN	M2R8D5	M2RJ87	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
M2R8D5_COCSN	M2S7X1_COCSN	M2R8D5	M2S7X1	AAA domain-containing protein; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.999
M2R8D5_COCSN	M2SNU6_COCSN	M2R8D5	M2SNU6	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2R8D5_COCSN	M2SUQ0_COCSN	M2R8D5	M2SUQ0	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2R8D5_COCSN	M2SVY6_COCSN	M2R8D5	M2SVY6	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2R8D5_COCSN	M2SZ51_COCSN	M2R8D5	M2SZ51	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2R8D5_COCSN	M2T2B6_COCSN	M2R8D5	M2T2B6	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.800
M2R8D5_COCSN	M2TGE3_COCSN	M2R8D5	M2TGE3	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2R8D5_COCSN	M2TI25_COCSN	M2R8D5	M2TI25	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
M2RG95_COCSN	M2R8D5_COCSN	M2RG95	M2R8D5	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2RG95_COCSN	M2RJ87_COCSN	M2RG95	M2RJ87	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	PCI domain-containing protein.	0.999
M2RG95_COCSN	M2S7X1_COCSN	M2RG95	M2S7X1	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	VWFA domain-containing protein.	0.999
M2RG95_COCSN	M2SNU6_COCSN	M2RG95	M2SNU6	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.998
M2RG95_COCSN	M2SUQ0_COCSN	M2RG95	M2SUQ0	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2RG95_COCSN	M2SVY6_COCSN	M2RG95	M2SVY6	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2RG95_COCSN	M2SZ51_COCSN	M2RG95	M2SZ51	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2RG95_COCSN	M2T2B6_COCSN	M2RG95	M2T2B6	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Uncharacterized protein.	0.800
M2RG95_COCSN	M2TGE3_COCSN	M2RG95	M2TGE3	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
M2RG95_COCSN	M2TI25_COCSN	M2RG95	M2TI25	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	PCI domain-containing protein.	0.998