STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2T3M6_COCSNUncharacterized protein. (334 aa)    
Predicted Functional Partners:
M2RFJ2_COCSN
Uncharacterized protein.
   
 
 0.488
M2SST3_COCSN
Uncharacterized protein.
   
 
 0.488
M2SRZ5_COCSN
Uncharacterized protein.
   
 
 0.453
M2SQ12_COCSN
Uncharacterized protein.
   
 0.452
M2RMQ9_COCSN
Uncharacterized protein.
    
 0.442
M2T240_COCSN
Uncharacterized protein.
  
     0.425
M2RAZ4_COCSN
Hist_deacetyl domain-containing protein.
    
 0.423
M2SP92_COCSN
Hist_deacetyl domain-containing protein.
    
 0.423
M2THB6_COCSN
Histone H2B; Belongs to the histone H2B family.
    
 0.419
M2SWI4_COCSN
Response regulatory domain-containing protein.
   
    0.404
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.