STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2T602_COCSNAspartate aminotransferase. (451 aa)    
Predicted Functional Partners:
M2RXB8_COCSN
Nsp1_C domain-containing protein.
    
 
 0.990
M2QXU6_COCSN
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.983
M2R0A9_COCSN
Prephenate/arogenate dehydrogenase domain-containing protein.
    
 0.979
M2TJF2_COCSN
Aspartate aminotransferase.
  
0.975
M2RBM2_COCSN
Aminotran_1_2 domain-containing protein.
   
 0.973
M2RLI4_COCSN
Malate dehydrogenase.
   
 0.973
M2S520_COCSN
Malate dehydrogenase.
   
 0.973
M2TGK0_COCSN
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.970
M2S4P1_COCSN
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.964
M2SNV8_COCSN
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
   
 0.964
Your Current Organism:
Bipolaris sorokiniana
NCBI taxonomy Id: 665912
Other names: B. sorokiniana ND90Pr, Bipolaris sorokiniana ND90Pr, Cochliobolus sativus ND90Pr
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.