STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII85588.1Putative MFS-type transporter. (461 aa)    
Predicted Functional Partners:
mepA
Penicillin-insensitive murein endopeptidase MepA.
      0.932
AII85589.1
Hypothetical protein.
       0.728
AII85586.1
Putative integral membrane protein.
       0.684
AII85590.1
Hypothetical protein, YGGT family.
       0.597
recQ
ATP-dependent DNA helicase RecQ.
  
    0.526
AII88018.1
Membrane transport protein.
  
     0.479
AII85585.1
Putative peptide chain release factor.
       0.438
AII85592.1
Hypothetical protein DUF328.
       0.428
AII87729.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.