STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII85968.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
AII85967.1
Integrase.
 
     0.667
flgA
Flagellar basal body P-ring biosynthesis protein FlgA.
  
     0.649
flgK
Flagellar hook-associated protein FlgK.
  
     0.640
flgE
Flagellar hook protein FlgE.
  
     0.596
AII86214.1
Hypothetical protein.
  
     0.551
AII86247.1
Putative helicase.
  
     0.543
fliL1
Protein FliL; Flagellar basal body-associated.
  
     0.532
AII85662.1
Putative phage integrase.
  
     0.498
flgJ
Flagellar rod assembly protein/muramidase FlgJ.
  
     0.493
AII86541.1
Transcriptional regulator, HxlR family.
  
     0.482
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.